BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024E03LP1|AL428222
(936 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1078 1739 0.0
>3x_Contig1078
Length = 3134
Score = 1739 bits (858), Expect = 0.0
Identities = 901/936 (96%)
Strand = Plus / Plus
Query: 1 cgcacaatcagctcaaartaagcttgaaaagagacttgggcagtcatcacgttcaaaaac 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 cgcacaatcagctcaaagtaagcttgaaaagagacttgggcagtcatcacgttcaaaaac 756
Query: 61 ctaatgaattggatgttacttccaatcctactggtgatatctcaraggtgtcagaatcca 120
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 757 ctaatgaattggatgttacttccaatcctactggtgatatctcaaagatgtcagaatcca 816
Query: 121 aacgtttaaracaaaacgctcaaccagatacaaaaccatacagacttatcgtgctagtga 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 aacgtttaaaacaaaacgctcaaccagatacaaaaccatacagacttatcgtgctagtga 876
Query: 181 gcatgccatatgatgggaaacgaacgarattcttcactttggtagattcaragactcttg 240
||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 877 gcatgccatatgatgggaaacgaacgaaattcttcactttggtagattcaaagactcttg 936
Query: 241 ataaattttggraggrttatgttaatgttgtraarrcaagtatgtctggattaattaarr 300
||||||||||| ||| ||||||||||||||| || ||||||||||||||||||||||
Sbjct: 937 ataaattttggaaggattatgttaatgttgtaaaaacaagtatgtctggattaattaaaa 996
Query: 301 agrrgrrgaagaagaagggtggtaagaraaactgatgaratattcccaacctattatcac 360
|| | |||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 997 agaagaagaagaagaagggtggtaagaaaaactgatgaaatattcccaacctattatcac 1056
Query: 361 ccatgartcataaatccgcratcgtgtagcattatrrrgtacatgttatatatrcatata 420
|||||| |||||||||||| ||||||||||||||| ||||||||||||||| ||||||
Sbjct: 1057 ccatgaatcataaatccgcaatcgtgtagcattataaagtacatgttatatatacatata 1116
Query: 421 tagrtgtcaaactgcaaaccagtaatttggttttcattcgaactccacgacaattgttcc 480
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1117 tagatgtcaaactgcaaaccagtaatttggttttcattcgaactccacgacaattgttcc 1176
Query: 481 cgatggataagttgtccgttcttccttgatcrctgtggttggctccaaacgggttctggg 540
|||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1177 cgatggataaattgtccgttcttccttgatcactgtggttggctccaaacgggttctggg 1236
Query: 541 cacaggtgaatrtrgktgagagtcatactgatactcgtratttggtttttcttgtgtgat 600
||||||||||| | | ||| |||||||||||||||||| |||||||||||||||||| ||
Sbjct: 1237 cacaggtgaatatagttgaaagtcatactgatactcgtaatttggtttttcttgtgtaat 1296
Query: 601 atcattctcgctgctagtgtcagataataaacctgctctgtataatgcaacgtatgcgta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1297 atcattctcgctgctagtgtcagataataaacctgctctgtataatgcaacgtatgcgta 1356
Query: 661 aatctcctcaattgttaatgaagcatcaaatcttctaataattctttcattttctagtct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1357 aatctcctcaattgttaatgaagcatcaaatcttctaataattctttcattttctagtct 1416
Query: 721 gatgcttactctgcaaccgtcacccgatggttctggcactagtacagattttctccaagc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1417 gatgcttactctgcaaccgtcacccgatggttctggcactagtacagattttctccaagc 1476
Query: 781 caaccatttctttttaagttggctttcctcgattaccctatccctttcctggtccctttc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1477 caaccatttctttttaagttggctttcctcgattaccctatccctttcctggtccctttc 1536
Query: 841 tagcgattcttggtatctcgaatcttgttgttctcttaataaccgttgcatttcctggta 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1537 tagcgattcttggtatctcgaatcttgttgttctcttaataaccgttgcatttcctggta 1596
Query: 901 ctgtctttgccttctaatctcaactaatactgarta 936
||||||||||||||||||||||||||||||||| ||
Sbjct: 1597 ctgtctttgccttctaatctcaactaatactgaata 1632
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5259
Number of Sequences: 1807
Number of extensions: 5259
Number of successful extensions: 116
Number of sequences better than 1.0e-20: 1
length of query: 936
length of database: 10,358,551
effective HSP length: 16
effective length of query: 920
effective length of database: 10,329,639
effective search space: 9503267880
effective search space used: 9503267880
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.4 bits)
S1: 12 (24.8 bits)
S2: 49 (99.8 bits)